Research Directions

How neural circuits form and maintain their exquisite architecture is an enduring question in developmental neurobiology. We aim to understand the molecular & cellular interactions of neurons and glial cells that pattern, shape and safeguard the impressive diversity of neural cell architectures and connectivity in neural circuits. Over the past years, we identified a hierarchical mode of brain circuit assembly, brain pioneer cells, molecular steps and conserved genes controlling brain assembly. We implicated genes, with homologs associated with human pathologies of neurodevelopment and neurodegeneration. We uncovered and characterized glia-neuron interactions that initiate brain formation or that safeguard brain architecture in age-progression, and in response to environmental changes. We will now analyze molecular networks of pioneer cell formation, the impact of pioneer cell and circuit architecture in animal behaviour, and the conservation of the discovered mechanisms.

Approach

We can use an integrative array of interdisciplinary approaches of advanced genetics, molecular & cell biology, live timelapse and quantitative imaging, transcriptomics, gene and cell manipulations in space and time to study our research questions. We harness Caenorhabditis elegans as a premier model to unravel neural circuit development, glial biology, and glia–neuron interactions. With its compact nervous system, rich molecular tools, and transparent body, C. elegans allows us to probe fundamental mechanisms that are conserved across metazoans. We also highlighted remarkable similarities between C. elegans & vertebrate circuits. We now establish collaborations to dissect general principles patterning circuit architecture, conserved between C. elegans and vertebrates.

Selected Publications

Remodeling of extracellular matrix collagen IV by MIG-6/papilin regulates neuronal architecture.
Nadour M, Leatis RIVR, Biard M, Frébault N, Rivollet N, St-Louis N, Blanchette C. R., Thackeray A, Perrat P, Bevilacqua C, Prevedel P, Cappadocia L, Doitsidou M, Rapti G, Bénard C. Y.* 2025, biorxiv
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Glia development and function in the nematode Caenorhabditis elegans.
Singhvi A$*, Shaham S$*, Rapti G$*. 2024, Cold Spring Harbor Perspectives in Biology 16 (12), a041346
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Age-progressive interplay of HSP-proteostasis, ECM-cell junctions and biomechanics ensures C. elegans astroglial architecture.
Coraggio F, Bhushan M, Roumeliotis S, Caroti F, Bevilacqua C, Prevedel R, Rapti G*. 2024, Nature Communications 15 (1), 2861
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Regulation of axon pathfinding by astroglia across genetic model organisms. 
Rapti G.*. 2023, Front Cell Neurosci. Oct 24;17:1241957
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Pulsed stimulated Brillouin microscopy enables high-sensitivity mechanical imaging of live and fragile biological specimens.
F Yang, C Bevilacqua, S Hambura, A Neves, A Gopalan, K Watanabe, …, Rapti G, Jechlinger M, Prevedel R. 2023, Nature Methods 20 (12), 1971-1979
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Open Frontiers in Neural Cell Type Investigations; Lessons From Caenorhabditis elegans and Beyond, Toward a Multimodal Integration.
Rapti G.* 
2022, Frontiers in Neuroscience 15, 787753
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A perspective on C. elegans neurodevelopment: from early visionaries to a booming neuroscience research
Rapti G.* 2020, Journal of Neurogenetics 34 (3-4), 259-272
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Glia initiate C. elegans brain assembly through non-canonical Chimaerin/Furin axon guidance. 
Rapti G.*, Li C, Shan A, Lu Y, Shaham S*. 2017, Nature Neuroscience, Oct;20(10):1350-1360
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